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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914379.1_cds_XP_016464380.1_57423
CDS Infomation

[gene=LOC107787339] [db_xref=GeneID:107787339] [protein=pheophytinase, chloroplastic-like isoform X1] [protein_id=XP_016464380.1] [location=complement(join(13692..13763,14454..14579,14694..14840,15452..15524,15602..15746,16289..16500,17059..17151,24840..25096))] [gbkey=CDS]
Sequence

ATGGCGATCTCAAGTTGTTCATCAATCTTCATATCCAAATTGGATTTCCCTGTTTCATGT
TCACAAAGCATAACCAACAAAATATCAATTAGTTCAATTCCTTTTCTTAGAAAATCTGTT
AGTACTAAGAAGTTTTTTATTTCCATTAAGACTCCAAAATCTTGTAGCTATATATCCAAT
TCACTTGTAAATGACTATTCAATTGATGAAACATCTAAAGAAAGCACAACCCAAGTTCCC
ATTGAAGTCAAAACCAGTATGTGGAACTGGAGGGGCTATTCCATTCGATACCAGTATTGT
GGCAACAGTGGCCCTGCGCTCATTTTAGTCCATGGTTTTGGAGCAAACAGTGACCATTGG
AGAAAAAATCTACCTGTTCTTGCACAATCACATCGGGTGTTCTCTATTGACCTTATTGGT
TATGGCTATTCAGACAAACCAAATCCTCGTGAGCTTGATGTAGACAACTTTTATACCTTT
GAAACATGGGGTTGCCAGCTAAACGATTTTTGTAAGGATGTTATCAGAGATAAAGCCTTC
TTCATTTGCAATTCCATTGGAGGACTTGTCGGTCTTCAGGCTGCAGTTATGGAACCACAA
CTCTGTAGAGGCATTCTTCTTTTAAATATCTCGCTCCGAATGCTGCATATAACAAAGCAG
CCTTGGTTCGGAAGATCACTGATTAAAGCATTTCAGAATTTATTGAGAAATACTGCAGTT
GGGAAATTCTTTTTCAAAAGTGTTGCTACGCCTGAATCAGTGAAGAATATTCTATGTCAG
TGTTACTATGACACATCCCAGGTGACAGATGAGTTAGTACAGGCCATCCTTCTTCCAGGG
CTCGAGCCTGGTGCTGTCGATGTGTTTCTTGAGTTCATTTGCTATTCAGGGGGTCCTCTT
CCTGAGGAACTACTGCCTCAAGTAAAGTGCCCTGTTCTGGTGGCGTGGGGTGACAAGGAT
CCTTGGGAGCCAATAGAACTTGGAAGAGCCTACGGCAAATTTGATACAGTTGAAGATTTC
GTTGTCCTCCCTAATGTTGGCCATTGTCCTCAGGATGAGGCACCTCATCTTGTGAACCCA
CTGGTGGAATCATTTGTTGCCCGCCATGCCAACGTTGCGAACTGA

Peptide Sequence

PEP ID

XP_016464380.1
PEP Infomation

PREDICTED: pheophytinase, chloroplastic-like isoform X1 [Nicotiana tabacum]
Sequence

MAISSCSSIFISKLDFPVSCSQSITNKISISSIPFLRKSVSTKKFFISIKTPKSCSYISN
SLVNDYSIDETSKESTTQVPIEVKTSMWNWRGYSIRYQYCGNSGPALILVHGFGANSDHW
RKNLPVLAQSHRVFSIDLIGYGYSDKPNPRELDVDNFYTFETWGCQLNDFCKDVIRDKAF
FICNSIGGLVGLQAAVMEPQLCRGILLLNISLRMLHITKQPWFGRSLIKAFQNLLRNTAV
GKFFFKSVATPESVKNILCQCYYDTSQVTDELVQAILLPGLEPGAVDVFLEFICYSGGPL
PEELLPQVKCPVLVAWGDKDPWEPIELGRAYGKFDTVEDFVVLPNVGHCPQDEAPHLVNP
LVESFVARHANVAN

Transcript Sequence

Gene sequence data has not been registered.